Brenneria goodwinii growth in vitro is improved by competitive interactions with other bacterial species associated with Acute Oak Decline.

Brenneria goodwinii, Rahnella victoriana and Gibbsiella quercinecans are three bacterial species frequently isolated together from oak displaying symptoms of Acute Oak Decline (AOD), which include weeping patches on trunks. All three bacterial species play a role in lesion formation in the current episode of AOD in Britain, although B. goodwinii is the most dominant. The ongoing research into stem lesion formation characteristic of this polybacterial syndrome has been focussed primarily on the pathogenicity, identification and taxonomy of these bacteria. As all three species were newly classified within the past ten years, there are many unanswered questions regarding their ecology and interactions with each other. To determine the effect of bacterial interactions on fitness in vitro, we examined pairwise (diculture) and multispecies (triculture) interactions between B. goodwinii, R. victoriana and G. quercinecans in oak leaf media microcosms. Additionally, the effect of co-culturing on the evolution of these species was determined and the evolved B. goodwinii strains were examined further by whole genome sequencing. Our results indicate that B. goodwinii thrived in monoculture with significantly higher viable cell counts than the other two species. Additionally, B. goodwinii performed well in pairwise culture with mutually competitive interactions observed between B. goodwinii and R. victoriana, and between B. goodwinii and G. quercinecans. In the multispecies triculture, B. goodwinii and R. victoriana appeared to exhibit co-ordinated behaviour to outcompete G. quercinecans. After four weeks B. goodwinii grown in co-culture with the other two species developed greater evolved fitness than the strain grown in monoculture as reflected by the increased viable cell counts. The competitive interactions taking place between the threes species indicated evolving improved fitness of B. goodwinii in vitro, that gave it a growth advantage over both R. victoriana and G. quercinecans which showed no significant changes in fitness. Overall, B. goodwinii gains greater benefit in terms of fitness from in vitro competitive interaction with the other two species.

Fish defaunation in reservoirs of the Lower Paranapanema River basin, Brazil / Defaunação de peixes em reservatórios do baixo rio Paranapanema, Brasil

Abstract Until now no study has used a defaunation index to quantify the decline of Neotropical freshwater fishes in environments fragmented by dams and reservoirs. So, we applied this index to 143 native fish in five reservoirs in the Lower Paranapanema River, that is situated in one of the Brazilian aquatic environments most impacted by anthropic degradation. Fish species were classified according to their functional groups, which were selected according to the biological characteristics that may reflect in defaunation events. The biggest reservoir in area with more tributaries and forest cover showed lowest defaunation index. The functional groups of fishes more affected by defaunation included species characterized by periphytivores, invertivores and algivores, non-migratory habit, with external fertilization, and parental care. Although reservoirs have different characteristics, this method can be tested in any other hydrographic basin. The results suggested continued conservation efforts to preserve the integrity of tributaries and the native fishes in reservoirs and pointed out the importance of maintaining native vegetation cover and fish restocking programs in the reservoirs with the highest defaunation values. Our finding can be use as the first data source for future studies using this defaunation index.

Resumo Até o momento nenhum estudo utilizou um índice de defaunação para quantificar o declínio de peixes neotropicais de água doce em ambientes fragmentados por barragens e reservatórios. Dessa forma, testamos esse índice em 143 espécies nativas em cinco reservatórios do baixo rio Paranapanema, que está localizado em um dos ambientes aquáticos brasileiros mais impactados pela degradação antrópica. As espécies de peixes foram classificadas de acordo com seus grupos funcionais selecionados de acordo com as características biológicas que podem influenciar nos eventos de defaunação. O maior reservatório em área, com mais tributários e maior cobertura florestal apresentou menor índice de defaunação. Os grupos funcionais mais afetados pela defaunação incluíram espécies caracterizadas por hábito alimentar perifitívoro, invertívoro e algívoro, hábito não migratório, com fertilização externa e cuidado parental. Embora os reservatórios tenham características diferentes, esse método pode ser testado em qualquer outra bacia hidrográfica. Os resultados sugerem esforços contínuos para preservar a integridade dos tributários e dos peixes nativos nos reservatórios e apontam a importância de manter a cobertura vegetal nativa e programas de estocagem nos reservatórios com maiores valores de defaunação. Nossos dados podem ser utilizados como a primeira base de dados para futuros estudos que utilizem o índice de defaunação.

Large-scale Degradation of the Tocantins-Araguaia River Basin.

The Tocantins-Araguaia Basin is one of the largest river systems in South America, located entirely within Brazilian territory. In the last decades, capital-concentrating activities such as agribusiness, mining, and hydropower promoted extensive changes in land cover, hydrology, and environmental conditions. These changes are jeopardizing the basin's biodiversity and ecosystem services. Threats are escalating as poor environmental policies continue to be formulated, such as environmentally unsustainable hydropower plants, large-scale agriculture for commodity production, and aquaculture with non-native fish. If the current model persists, it will deepen the environmental crisis in the basin, compromising broad conservation goals and social development in the long term. Better policies will require thought and planning to minimize growing threats and ensure the basin's sustainability for future generations.

Population biology of Astyanax lacustris (Pisces, Characiformes) in a Neotropical reservoir and its tributaries.

The aging process of reservoirs has been extensively investigated; however, little is known about how fish populations are adjusted after many years of impoundment. Thus, this study aimed to compare the diet, length-weight relationship, sizes classes, variation in size, and age of Astyanax lacustris Lütken, 1875 collected from lotic and lentic habitats of an aging reservoir. The study group consisted of 730 captured fishes. We found that specimens collected from lotic habitats had a wider range of size classes (1.0 to 12.0 cm), were linked to a high frequency of juveniles (48.7%), and had greater feeding activity (higher stomach fullness). In contrast, fishes collected from lentic environments exhibited high rates of capture (78.4%), increased frequency of adults (87.3%), and higher values of mean standard length. The length-weight relationship indicated that lentic fishes were heavier than fish collected from lotic areas. Moreover, we observed 37 food items in A. lacustris diet, mainly plant material, algae, Cladocera, Hymenoptera, Coleoptera, and Ephemeroptera. Differences among the diet of fishes between sites were evidenced with Permanova (p < 0.05). Astyanax lacustris can be considered a persistent species in Chavantes Reservoir after aging, encountering conditions to complete its life span and adjusting to food resources.

Morphological deformities in the invasive driftwood catfish Trachelyopterus galeatus in the Upper Paraná River basin, Brazil: a sign of human impact?

In this study, the authors report morphological deformities in driftwood catfish Trachelyopterus galeatus (Auchenipteridae), an invasive catfish occurring in the Upper Paraná River basin, Brazil. The frequency of anomalous individuals reached 18.3% of all catches. X-ray images showed anomalies, or total absence of structures, in the pelvic girdle. The authors also observed the absence of the adipose fin and mental barbels. These findings are of extreme importance for evidencing the anthropogenic impact on aquatic communities as the region suffers within fragmentation by dams and pollution from several human activities. This sort of information can be used in management systems and environmental monitoring, especially to protect other species and the native fish assemblage.

Malacofauna bentônica do Lago Igapó, Londrina (Paraná, Brasil), com ênfase na espécie invasora mexilhão-dourado Limnoperna fortunei (Dunker, 1857) / Benthic malacofauna from the Igapó Lake, Londrina (Paraná, Brazil), with emphasis on the invasive species Golden Mussel Limnoperna fortunei (Dunker, 1857)

Objetivo: quantificar a abundância e a biomassa de moluscos bentônicos no Lago Igapó I, Londrina, Paraná, Brasil. Material e Métodos: foram realizadas duas coletas no Lago Igapó I, a primeira em junho de 2015 e a segunda em fevereiro de 2016. O substrato (incluindo os moluscos incrustados) foi amostrado utilizando um quadrante com área de 1 m2, onde 10 amostragens foram realizadas entre três pontos distintos do lago. Os moluscos capturados foram anestesiados e eutanasiados por superexposição ao gelo. Posteriormente, o material foi quantificado em abundância (n) e biomassa total (kg), e armazenado em tambores contendo formol 4% tamponado com carbonato de cálcio. Resultados: foram identificadas cinco espécies de moluscos, sendo três não nativas (Limnoperna fortunei, Corbicula fluminea e Melanoides tuberculata), uma nativa (Aylacostoma cf. tenuilabris) e um indivíduo do gênero Pomacea. Em ambas as coletas, L. fortunei compreendeu aproximadamente 90% da abundância e biomassa total. A partir da densidade média de L. fortunei e a área total do Lago Igapó I, estimou-se que a população total de mexilhões-dourados pode chegar a 633 milhões de indivíduos, correspondendo a 638 toneladas de biomassa. Conclusão: é evidente a dominância da espécie invasora L. fortunei no Lago Igapó I, onde esta pode causar diversos efeitos negativos, como alterações no ciclo de nutrientes, redução de espécies nativas, introdução de parasitos, bioacumulação de metais pesados na cadeia trófica, diminuição da qualidade da água para uso humano e obstrução de encanamentos com risco de alagamentos. Desta forma, recomenda-se uma imediata ação de manejo neste ambiente para retirada de indivíduos da espécie, com consequente redução de sua abundância.(AU)

Objective: quantify the abundance and biomass of benthic molluscs in Igapó Lake I, Londrina, Paraná, Brazil. Material and Methods: two samplings was made at Igapó Lake I, first in June 2015 and then in February 2016. The substrate (including all embedded molluscs) was sampled using a 1 m2 quadrant, where 10 samples were taken between three distinct points from the lake. All molluscs captured were anesthetized and euthanized by overexposure to ice. Subsequently, the material was quantified in quantity (n) and total biomass (kg), and stored in barrels containing 4% formaldehyde buffered with calcium carbonate. Results: five species of molluscs were identified, three non native species (Limnoperna fortunei, Corbicula fluminea and Melanoides tuberculata), one native (Aylacostoma cf. tenuilabris) and one Pomacea sp. In both sampling, L. fortunei comprised approximately 90% of the abundance and total biomass. From the average density of L. fortunei and the total area of the Igapó Lake I, it was estimated that the total population of golden mussels can reach 633 million individuals, corresponding to 638 tons of biomass. Conclusion: the dominance of the invasive species L. fortunei in Igapó Lake I is evident, where it can cause several negative effects, such as alterations in the nutrient cycle, reduction of native species, introduction of parasites, bioaccumulation of heavy metals in the food chain, decreased quality of water for human use and obstruction of pipes obstruction with risk of overflow. Therefore, we recommend an immediate management action in this environment in order to remove individuals of this species and, consequently, to reduce its abundance. (AU)

Taxonomic loss and functional reduction over time in the ichthyofauna of the Taquaruçu Reservoir, lower Paranapanema River, Southern Brazil

We evaluated the fish composition and ecological attributes of the ichthyofauna collected in a limnological zone of the Taquaruçu Reservoir, lower Paranapanema River. Information about the fish community was updated when compared to the previous study (2006). Non-metric multidimensional scaling (NMDS) showed differences in species composition between periods and community weighted means (CWMs) exhibited changes in functional composition over time. Four functional indices were used in the principal coordinate analysis (PcoA) to measure changes in the functional space of species, whereas functional β-diversity inspected differences in the traits composition between the periods. 1,203 individuals were sampled of 43 species, being 16 non-native and 14 new records. Compared to 2006, 27 species were absent, most of them native to Loricariidae and Anostomidae, while Curimatidae and Pimelodidae decreased in abundance. Functional indexes showed a reduction in functional diversity, whereas new species records exhibited functional redundancy. It might have occurred a simplification of the fish community over time, excluding the migratory and specialists species such as the herbivores and detritivores. Accordingly, we concluded that the ichthyofauna of the Taquaruçu Reservoir might have been undergoing a process towards biotic homogenization.(AU)

Avaliamos a composição de peixes e atributos ecológicos da ictiofauna coletada em uma zona limnológica do reservatório de Taquaruçu, baixo rio Paranapanema. As informações sobre a comunidade de peixes foram atualizadas quando comparadas ao estudo anterior (2006). O escalonamento multidimensional não métrico (NMDS) mostrou diferenças na composição de espécies entre os períodos, e as médias ponderadas da comunidade (CWMs) exibiram mudanças na composição funcional ao longo do tempo. Quatro índices funcionais foram utilizados na análise de coordenadas principais (PcoA) para medir as mudanças no espaço funcional das espécies, enquanto a β-diversidade funcional inspecionou diferenças na composição de traços entre os períodos. Foram amostrados 1,203 indivíduos de 43 espécies, sendo 16 não-nativas e 14 novos registros. Em comparação com 2006, 27 espécies estavam ausentes, a maioria nativa de Loricariidae e Anostomidae, enquanto Curimatidae e Pimelodidae diminuíram em abundância. Os índices funcionais mostraram redução na diversidade funcional, enquanto novos registros de espécies exibiram redundância funcional. Pode ter ocorrido uma simplificação da comunidade de peixes ao longo do tempo, excluindo as espécies migradoras e especialistas como os herbívoros e detritívoros. Dessa forma, concluímos que a ictiofauna do reservatório de Taquaruçu pode estar sofrendo um processo de homogeneização biótica.(AU)

Use of DNA barcode in the identification of fish eggs in tributaries of the Paranapanema River basin.

Fish eggs are often excluded from identification analysis since at this stage of development there are few morphological characters. The correct identification of eggs can provide important information about spawning areas of species. The current work aimed to identify fish eggs in the Tibagi and Cinzas Rivers using the DNA barcode to obtain information on richness and diversity, adding to the existing data in the area. Of the 928 sequences analyzed using the BOLD Systems database, 99.78% were able to be identified at a specific level, demonstrating a high success rate for egg identification. The samples resulted in 25 species, 11 families, and 2 orders. Of the 25 species found, more than half (60%) present reproductive migration behavior, indicating that the tributaries of the Capivara reservoir are being used as a migratory route by these species. Eggs of rare and endangered species were found, indicating these tributaries as spawning grounds for these species. The results demonstrate the importance of identifying fish eggs in reservoir-influenced environments to recognize breeding areas of native and endangered species, as well as the importance of the Tibagi and Cinzas Rivers for the maintenance of native fish species in the Paranapanema River.

Fish fauna from the Paranapanema River basin, Brazil / Fauna de peixes da bacia do rio Paranapanema, Brasil

Abstract: The Paranapanema River is an important, extensively explored tributary of the Upper Paraná River basin. The fish fauna of the Paranapanema River has been investigated since the 1990s; however, no study has characterized the richness of fish species throughout the basin, including the main channel of the river, marginal lagoons, its tributaries, and sub-tributaries. Thus, we performed a review with 90 independent studies conducted at the upper, middle, and lower sections of the basin. We recorded 225 species, of which 165 were native, and 60 were non-native. We found that 77% of the species within the basin are composed by Siluriformes and Characiformes. Cichliformes had a significant number of non-native species established in impoundment sections of the basin. Incidence-Based Estimators (Bootstrap and Chao 2) demonstrated that the richness of native species is still underestimated. Some native (e.g., Hypostomus ancistroides) and non-native species (e.g., Plagioscion squamosissimus) are widely distributed in the basin, while others had a more restricted distribution. Among the registered species, the family Bryconidae had the highest number of representatives with threatened conservation status. In addition, we observed that the Capivara Reservoir and its tributaries were the most sampled regions, with the majority of studies performed in the Lower Paranapanema basin. The species richness recorded in large tributaries, such as Tibagi, Cinzas, Congonhas, and Pirapó rivers is critical for maintaining the fish fauna in the Paranapanema River. Our contribution may be used to support management actions and conservation strategies, as well as to indicate regions in the basin that need to be better inventoried.

Resumo: O rio Paranapanema é um importante tributário, amplamente explorado da bacia do Alto rio Paraná. A fauna de peixes do rio Paranapanema vem sendo investigada desde a década de 1990; no entanto, nenhum estudo caracterizou a riqueza de espécies de peixes em toda a bacia, incluindo o canal principal do rio, lagoas marginais, seus tributários e sub-tributários. Assim, realizamos uma revisão com 90 estudos independentes conduzidos nas regiões superior, média e inferior da bacia. Foram registradas 225 espécies, das quais 165 eram nativas e 60 eram não nativas. Verificamos que 77% das espécies dentro da bacia são compostas por Siluriformes e Characiformes. Cichliformes apresentou um número significativo de espécies não nativas estabelecidas em áreas de represamento da bacia. Estimadores de riqueza baseados em incidência (Bootstrap e Chao 2) demonstraram que a riqueza de espécies nativas ainda é subestimada. Algumas espécies nativas (e.g., Hypostomus ancistroides) e não nativas (e.g., Plagioscion squamosissimus) estão amplamente distribuídas na bacia, enquanto outras tem sua distribuição mais restrita. Entre as espécies registradas, a família Bryconidae obteve o maior número de representantes com status de conservação ameaçado. Além disso, observamos que o reservatório de Capivara e seus afluentes foram as regiões mais amostradas, sendo a maioria dos estudos realizados na bacia do baixo Paranapanema. A riqueza de espécies registrada em grandes afluentes, como os rios Tibagi, Cinzas, Congonhas e Pirapó, é fundamental para a manutenção da ictiofauna no rio Paranapanema. Nossa contribuição pode ser usada para apoiar ações de manejo e estratégias de conservação, bem como para indicar regiões na bacia que precisam ser melhor inventariadas.

Interaction of Antimicrobial Lipopeptides with Bacterial Lipid Bilayers.

The resistance of pathogens to traditional antibiotics is currently a global issue of enormous concern. As the discovery and development of new antibiotics become increasingly challenging, synthetic antimicrobial lipopeptides (AMLPs) are now receiving renewed attention as a new class of antimicrobial agents. In contrast to traditional antibiotics, AMLPs act by physically disrupting the cell membrane (rather than targeting specific proteins), thus reducing the risk of inducing bacterial resistance. In this study, we use microsecond-timescale atomistic molecular dynamics simulations to quantify the interaction of a short AMLP (C16-KKK) with model bacterial lipid bilayers. In particular, we investigate how fundamental transmembrane properties change in relation to a range of lipopeptide concentrations. A number of structural, mechanical, and dynamical features are found to be significantly altered in a non-linear fashion. At 10 mol% concentration, lipopeptides have a condensing effect on bacterial bilayers, characterized by a decrease in the area per lipid and an increase in the bilayer order. Higher AMLP concentrations of 25 and 40 mol% destabilize the membrane by disrupting the bilayer core structure, inducing membrane thinning and water leakage. Important transmembrane properties such as the lateral pressure and dipole potential profiles are also affected. Potential implications on membrane function and associated proteins are discussed.

Physical properties of model biological lipid bilayers: insights from all-atom molecular dynamics simulations.

The physical properties of lipid bilayers are sensitive to the specific type and composition of the lipids that make up the many different types of cell membranes. Studying model bilayers of representative heterogeneous compositions can provide key insights into membrane functionality. In this work, we use atomistic molecular dynamics simulations to characterize key properties in a number of bilayer membranes of varying composition. We first examine basic properties, such as lipid area, volume, and bilayer thickness, of simple, homogeneous bilayers comprising several lipid types, which are prevalent in biological membranes. Such lipids are then used in simulations of heterogeneous systems representative of bacterial, mammalian, and cancer membranes. Our analysis is especially focused on depth-dependent, transmembrane profiles; in particular, we calculate lateral pressure and dipole potential profiles, two fundamental properties which play key roles in a large number of biological functions.

Effects of lipid composition on membrane permeation.

Passive permeation through lipid membranes is an essential process in biology. In vivo membranes typically consist of mixtures of lamellar and nonlamellar lipids. Lamellar lipids are characterized by their tendency to form lamellar sheet-like structures, which are predominant in nature. Nonlamellar lipids, when isolated, instead form more geometrically complex nonlamellar phases. While mixed lamellar/nonlamellar lipid membranes tend to adopt the ubiquitous lamellar bilayer structure, the presence of nonlamellar lipids is known to have profound effects on key membrane properties, such as internal distributions of stress and elastic properties, which in turn may alter related biological processes. This work focuses on one such process, i.e., permeation, by utilising atomistic molecular dynamics simulations in order to obtain transfer free energy profiles, diffusion profiles and permeation coefficients for a series of thirteen small molecules and drugs. Each permeant is tested on two bilayer membranes of different lipid composition, i.e., purely lamellar and mixed lamellar/nonlamellar. Our results indicate that the presence of nonlamellar lipids reduces permeation for smaller molecules (molecular weight < 100) but facilitates it for the largest ones (molecular weight > 100). This work represents an advancement towards the development of more realistic in silico permeability assays, which may have a substantial future impact in the area of rational drug design.

Spatial distribution and habitat use by early fish stages in a dammed river basin, Southern Brazil / Distribución espacial y uso de hábitat de peces en estadios tempranos de una represa del sur de Brasil

Abstract Fish diversity loss is threatened by the construction of dams as they prevent the regular natural dispersal among populations. Thus, conservation of key riverine habitats for fish reproduction may be essential for the recruitment of new native species of fish. The present study aimed to identify key habitats for fish spawning and early development in the Paranapanema River basin, as well as to determine the taxonomic composition, reproductive and life-history strategy, and to report spatial distribution of eggs, larvae and juveniles. The importance of lagoons, tributaries, and sub-tributaries was evaluated in the Paranapanema River basin between October 2012 and March 2013. Eggs and larvae samples were collected at dawn and dusk with conical plankton nets (0.5 mm mesh size), whereas juveniles were captured during the day with seine and sieve (0.5 cm mesh size). A total of 547 eggs, 904 larvae and 1 228 juveniles were captured. We observed that 2 larvae and 288 juveniles of non-migratory species, parental care, and equilibrium life-history strategy, predominated in lagoons and tributaries. On the other hand, 13 larvae and 60 juveniles of short migratory distance, no parental care, and periodic life-history strategy predominated in sub-tributaries. The highest densities of eggs were recorded in tributaries and sub-tributaries (Tukey's test, P = 0.001 and P = 0.03, respectively), and the highest densities of larvae were recorded for lagoons and tributaries (P = 0.005 and P = 0.0001, respectively). Captures of eggs and larvae were higher at night; while the highest catches per unit effort of juveniles were recorded for tributaries and sub-tributaries. Fish species that adopt different life-history strategies can use diverse types of habitats during the early stages. Lagoons, tributaries and sub-tributaries of the Paranapanema River play different roles in the reproductive success of fish fauna in a heavily modified basin. The preservation of spawning and nursery areas trapped between reservoirs is necessary for Neotropical fish species recruitment and survival. Rev. Biol. Trop. 66(2): 605-621. Epub 2018 June 01.

Resumen Los riesgos de pérdida de diversidad de peces aumentan con la construcción de represas, ya que impide la dispersión de individuos entre las poblaciones. Por lo tanto, la conservación del habitat ribereño clave para la reproducción de peces puede ser esencial para el reclutamiento de nuevos individuos de especies nativas. El presente estudio tiene como objetivo identificar hábitats clave para el desove y el desarrollo temprano de peces en la cuenca del río Paranapanema, así como determinar la composición taxonómica, la estrategia reproductiva y la historia de vida, y reportar la distribución espacial de huevos, larvas y juveniles. Se evaluó la importancia de lagunas, afluentes y subafluentes en la cuenca del río Paranapanema entre octubre de 2012 y marzo de 2013. Se recogieron muestras de huevos y larvas al amanecer y al atardecer con redes de plancton cónico (tamaño de malla de 0,5 mm), mientras que los juveniles fueron capturados durante el día con redes de cerco y tamiz (tamaño de malla de 0,5 cm). Se capturaron un total de 547 huevos, 904 larvas y 1 228 juveniles. Como resultado fue observado que 2 larvas y 288 juveniles de especies no migratorias, cuidado parental y estrategia de vida de equilibrio son predominantes en lagunas y afluentes. Por otro lado, 13 larvas y 60 juveniles de espécies migratorias de corta distancia, sin cuidado parental y estrategia de vida periódica predominaron en subafluentes. Se registraron las densidades más altas de huevos para afluentes y subafluentes (Prueba de Tukey, P = 0.001 y P = 0.03, respectivamente), y se registraron las densidades más altas de larvas para las lagunas y afluentes (P = 0.005 y P = 0.0001, respectivamente). Las capturas de huevos y larvas eran más altas por la noche. Las mayores capturas por unidad de esfuerzo de juveniles se registraron para los afluentes y subafluentes. Las especies de peces que adoptan diferentes estrategias de historia de vida pueden utilizar diversos tipos de hábitats durante las primeras etapas. Lagunas, afluentes y subafluentes del río Paranapanema desempeñan diferentes papeles en el éxito reproductivo de la fauna de peces en una cuenca fuertemente modificada. La preservación de áreas de desove y cría atrapadas entre el embalse es necesaria para el reclutamiento de especies de peces neotropicales.

Aquaculture expansion in Brazilian freshwaters against the Aichi Biodiversity Targets.

The Convention on Biological Diversity proposed the Aichi Biodiversity Targets to improve conservation policies and to balance economic development, social welfare, and the maintenance of biodiversity/ecosystem services. Brazil is a signatory of the Aichi Biodiversity Targets and is the most diverse country in terms of freshwater fish, but its national policies have supported the development of unsustainable commercial and ornamental aquaculture, which has led to serious disturbances to inland ecosystems and natural resources. We analyzed the development of Brazilian aquaculture to show how current aquaculture expansion conflicts with all 20 Aichi Targets. This case suggests that Brazil and many other megadiverse developing countries will not meet international conservation targets, stressing the need for new strategies, such as the environmental management system, to improve biodiversity conservation.

First chromosome data on Steindachneridion doceanum (Siluriformes: Pimelodidae): a critically endangered catfish endemic of the Doce River basin, Brazil

The present report represents the first cytogenetic description of Steindachneridion doceanum, great catfish which is currently at high extinction risk and it is listed as threatened on the red list of the Brazilian Ministry of the Environment, also are suggested karyotype relationships with other species of the same genus endemic from other river basins. The results revealed a diploid number of 2n = 56 and the karyotype composed of 18 metacentric, 20 submetacentric, 10 subtelocentric and 8 acrocentric chromosomes (NF = 104). The AgNORs and CMA3 signals were coincident in location occupying the short arm of an acrocentric chromosome pair (25th), in a secondary constriction. The 5S rDNA genes were localized on the short arms of one subtelocentric pair. C-banding revealed terminal blocks on the short arms on many chromosomes as well as terminal positive bands at the both ends of a submetacentric pair. C banding also revealed a large heterochromatic block in the secondary constriction (25th) region that was coincident with the AgNORs sites and CMA3+ bright bands. In spite S. doceanum represent an endemic taxon, in spite their geographic isolation their cytogenetic characteristics show similarities with other species of the genus.(AU)

O presente trabalho apresenta a primeira descrição citogenética de Steindachneridion doceanum, grande bagre que se encontra atualmente em alto risco de extinção e listado como ameaçado na lista vermelha do Ministério do Meio Ambiente, também sugere relações cariotípicas com outras espécies do mesmo gênero, endêmicas de outras bacias hidrográficas. Os resultados revelaram um número diplóide de 56 cromossomos e o cariótipo composto por 18 elementos metacêntricos, 20 submetacêntricos, 10 subtelocêntricos e 8 acrocêntricos (NF = 104). As marcações AgNORs e CMA3 foram coincidentes ocupando o braço curto de um par de cromossomos acrocêntricos (par 25), em uma constrição secundária. Os genes 5S rDNA foram detectados nos braços curtos de um par subtelocêntrico. A banda C revelou blocos terminais nos braços curtos em vários cromossomos, bem como blocos terminais nas duas extremidades de um par submetacêntrico. A banda C também evidenciou um grande bloco heterocromático na constrição secundária (par 25) coincidente com os sítios AgNORs e as bandas CMA3 positivas. Apesar de S. doceanum representar um táxon endêmico, suas características citogenéticas mostram semelhanças com outras espécies do gênero das quais se encontra geograficamente isolado.(AU)

Effects of High Pressure on Phospholipid Bilayers.

The response of lipid membranes to changes in external pressure is important for many biological processes, and it can also be exploited for technological applications. In this work, we employ all-atom molecular dynamics simulations to characterize the changes in the physical properties of phospholipid bilayers brought about by high pressure (1000 bar). In particular, we study how the response differs, in relation to different chain unsaturation levels, by comparing monounsaturated 1-palmitoyl-2-oleoyl-phosphatidylcholine (POPC) and biunsaturated dioleoyl-phosphatidylcholine (DOPC) bilayers. Various structural, mechanical, and dynamical features are found to be altered by the pressure increase in both bilayers. Notably, for most properties, including bilayer area and thickness, lipid order parameters, lateral pressure profile, and curvature frustration energy, we observe significantly more pronounced effects for monounsaturated POPC than biunsaturated DOPC. Possible biological implications of the results obtained are discussed, especially in relation to how different lipids can control the structure and function of membrane proteins.

Small size today, aquarium dumping tomorrow: sales of juvenile non-native large fish as an important threat in Brazil

Informal sales of large-bodied non-native aquarium fishes (known as "tankbusters") is increasing among Brazilian hobbyists. In this study, we surveyed this non-regulated trade on Facebook® from May 2012 to September 2016, systematically collecting information about the fishes available for trading: species, family, common/scientific names, native range, juvenile length, behavior, number of specimens available in five geographical regions from Brazil. We also assessed the invasion risk of the most frequently sold species using the Fish Invasiveness Screening Test (FIST). We found 93 taxa belonging to 35 families. Cichlidae was the dominant family, and most species were native to South America. All species are sold at very small sizes (< 10.0 cm), and most display aggressive behavior. The hybrid Amphilophus trimaculatus × Amphilophus citrinellus, Astronotus ocellatus, Uaru amphiacanthoides, Osteoglossum bicirrhosum, Cichla piquiti, Pangasianodon hypophthalmus, Datnioides microlepis and Cichla kelberi were the main species available. The southeast region showed the greatest trading activity. Based on biological traits, the FIST indicated that Arapaima gigas, C. kelberi and C. temensis are high-risk species in terms of biological invasions via aquarium dumping. We suggest management strategies such as trade regulations, monitoring, euthanasia and educational programs to prevent further introductions via aquarium dumping.(AU)

A venda de juvenis de peixes não-nativos de grandes dimensões, chamados de "peixes jumbo", está aumentando entre aquaristas no Brasil. Neste trabalho, pesquisou-se este comércio informal pelo Facebook® de maio/2012 a setembro/2016, coletando-se informações sobre espécies, família, nomes vulgares/científicos, origem, tamanho juvenil, comportamento e número/frequência de exemplares disponíveis nas cinco regiões geográficas do Brasil. Também avaliou-se o risco de invasão das espécies mais vendidas usando o protocolo Fish Invasiveness Screening Test (FIST). Foram encontradas 93 espécies pertencentes a 35 famílias. Cichlidae foi a família dominante, e a maioria das espécies é nativa da América do Sul. Todas as espécies foram vendidas como juvenis (< 10.0 cm), e a maioria exibe comportamento agressivo. O híbrido Amphilophus trimaculatus × Amphilophus citrinellus, Astronotus ocellatus, Uaru amphiacanthoides, Osteoglossum bicirrhosum, Cichla piquiti, Pangasianodon hypophthalmus, Datnioides microlepis e Cichla kelberi foram as espécies mais comercializadas. A região sudeste apresentou a maior porcentagem de vendas, e o FIST mostrou que Arapaima gigas, C. kelberi e C. temensis foram consideradas de alto risco para desencadear invasões biológicas mediadas por descarte de aquários. Recomendações como a regulação do comércio, monitoramento, sacrifício das espécies e campanhas educacionais para os aquaristas são sugeridas para evitar futuras introduções de peixes via descarte de aquários.(AU)

Effects of Lipid Composition on Bilayer Membranes Quantified by All-Atom Molecular Dynamics.

Biological bilayer membranes typically contain varying amounts of lamellar and nonlamellar lipids. Lamellar lipids, such as dioleoylphosphatidylcholine (DOPC), are defined by their tendency to form the lamellar phase, ubiquitous in biology. Nonlamellar lipids, such as dioleoylphosphatidylethanolamine (DOPE), prefer instead to form nonlamellar phases, which are mostly nonbiological. However, nonlamellar lipids mix with lamellar lipids in biomembrane structures that remain overall lamellar. Importantly, changes in the lamellar vs nonlamellar lipid composition are believed to affect membrane function and modulate membrane proteins. In this work, we employ atomistic molecular dynamics simulations to quantify how a range of bilayer properties are altered by variations in the lamellar vs nonlamellar lipid composition. Specifically, we simulate five DOPC/DOPE bilayers at mixing ratios of 1/0, 3/1, 1/1, 1/3, and 0/1. We examine properties including lipid area and bilayer thickness, as well as the transmembrane profiles of electron density, lateral pressure, electric field, and dipole potential. While the bilayer structure is only marginally altered by lipid composition changes, dramatic effects are observed for the lateral pressure, electric field, and dipole potential profiles. Possible implications for membrane function are discussed.

The yeast model suggests the use of short peptides derived from mt LeuRS for the therapy of diseases due to mutations in several mt tRNAs.

We have previously established a yeast model of mitochondrial (mt) diseases. We showed that defective respiratory phenotypes due to point-mutations in mt tRNA(Leu(UUR)), tRNA(Ile) and tRNA(Val) could be relieved by overexpression of both cognate and non-cognate nuclearly encoded mt aminoacyl-tRNA synthetases (aaRS) LeuRS, IleRS and ValRS. More recently, we showed that the isolated carboxy-terminal domain (Cterm) of yeast mt LeuRS, and even short peptides derived from the human Cterm, have the same suppressing abilities as the whole enzymes. In this work, we extend these results by investigating the activity of a number of mt aaRS from either class I or II towards a panel of mt tRNAs. The Cterm of both human and yeast mt LeuRS has the same spectrum of activity as mt aaRS belonging to class I and subclass a, which is the most extensive among the whole enzymes. Yeast Cterm is demonstrated to be endowed with mt targeting activity. Importantly, peptide fragments ß30_31 and ß32_33, derived from the human Cterm, have even higher efficiency as well as wider spectrum of activity, thus opening new avenues for therapeutic intervention. Bind-shifting experiments show that the ß30_31 peptide directly interacts with human mt tRNA(Leu(UUR)) and tRNA(Ile), suggesting that the rescuing activity of isolated peptide fragments is mediated by a chaperone-like mechanism. Wide-range suppression appears to be idiosyncratic of LeuRS and its fragments, since it is not shared by Cterminal regions derived from human mt IleRS or ValRS, which are expected to have very different structures and interactions with tRNAs.